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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015925192.1_cds_XP_016473458.1_65587
CDS Infomation

[gene=LOC107795352] [db_xref=GeneID:107795352] [protein=probable leucine-rich repeat receptor-like protein kinase At5g49770] [protein_id=XP_016473458.1] [location=complement(join(41123..41593,42090..42325,42715..42934,43109..43245,43327..43485,44058..44533,44694..44828,44942..45013,45231..45305,45470..45538,45624..45695,45798..45869,46328..46402,46477..46638,47117..47188,47273..47347,47453..47524,47609..47729,48556..48658))] [gbkey=CDS]
Sequence

ATGGTAGTTTCTCTGGCAATGATGCCAAGGAGAATTCAGCTTTGTTTTCTTGTTGTTTGG
ATACATGTTCTGGCAATATCAGCATGGACAAATCCTGATGATTTTGCTGCACTACAGTCT
CTCAAGGATTCATGGCAGAATGTTCCACCCAATTGGGCTGGAGCAGATCCCTGTGGGAGT
CAATGGGAAGGAATTGGATGCAGAAATTCACGAGTGATTTCTATAACATTATCAAGTATG
AGTTTGAGCGGTCAGCTATCTGGAGACATTCAAGGATTATCTGAATTGCAGACTTTGGAT
CTTTCATACAACAAGGAGTTGACAGGATCTCTTCCTCAGTCTATTGGAAAATTGACAAAG
CTATCAAATTTGATCCTTGTTGGTTGTGGGTTTTCTGGACCAATACCAGACTCCATTGGA
TCTCTGACTCAGCTGGTTTTTCTATCTTTAAACTCTAACAACTTTATTGGACGAATACCT
GCTACCATTGGCTATCTTTCAAAGCTTTATTGGCTGGATTTAGCTGACAATAAGCTTACT
GGAACACTTCCAGTCTCTAGTGGGAGCTCACCTGGACTTGATATGCTTCTTCACACTAAG
CACTTTCATTTTGGGAAGAATCAGCTATCCGGTGAAATCCCAGCTCAACTTTTCCATTCT
AATCTGACTCTGATTCATCTGCTAGTGGAGAACAACCAGCTTACTGGAAATATACCGGAT
ACGTTAGGACTTGTCCAGACTATGGAAGTGCTTCGTCTTGACAGGAATTCGTTAAGCGGA
TCTGTGCCACAAAACCTCAACAATCTCACACATGTCAATGAACTCCACATATCAAACAAT
AATTTGAATGGTCTTTTGCCGAATCTCACTGGCATGAATGTCCTCAATTACTTGGACATG
AGCAATAATTCATTTAATGCATCAGATTTCCCATCATGGATTCCAGACCTGCAATCTCTG
ACAACAGTGGCAATGGAAAACACAGGACTCCAAGGATTAGTTCCAGCTAAATTATTCAGC
CTTTTCCAGTTGCAGACTGTCAATATGAGGAAAAACAGACTTAATGGCACACTTGAAATT
GACTCCTCGTATAGCAACCAGTTGCAACTCATTGATATGCAGAGCAATCTTATTGATTCA
TTTACTCAAAGACCAGGATATCCCTTTCAGATCTTACTTGCAGGTAATCCTGTCTGCAAT
GAAGGAACAACACAAACTTACTGTGTCCAAGCCCAACAAGCTGATTCATATTCTACTCCA
CCAGAAAATTGCTTGCCAACTGAGTGCAGCTCTGATCAAATTTCTAGTCCTACCTGTAAA
TGTGCTTTTCCATATACAGGCAACCTAGTCTTCAGAGCTCCTTCCTTTTCCAACTTGGGA
AACAAAACTACCTATGAGACTCTCCAAAAGTCTTTGATGCTTTCATTCCAAAACCGTCAA
CTGCCTGTCGACTCAGTTTCCCTCAGCAACCCTACAAAAAATTTAGATGACTACCTTGTA
ATACACCTGCAAGTCTTTCCTTCTATCCAAGATTATTTCAATCGAACTGGAGTTTCTGGA
ATAGGTTTTGTGCTTAGTAATCAGACTTTCAAGCCTCCGTCGACATTTGGACCTTTCTTC
TTCATTGGTGAAGGCTACAAATACTTCGATGGTGCATCCAGTGGATCACACAAATCATCT
AGTACAGGCATTATCATTGGAGCAGCAGTTGGTGGTTCTGTCCTTGTAATTTTAGCACTA
ATCGTTGGTCTTTATGCTTTCCGGCAAAAGAAAAGAGCTGAAGATGCTGCAAGGAGGAGT
GATCCTTTTGCATCCTGGGACTCAAATAAACATAGTGGTGCTGTTCCACAGTTGACAGGA
GCAAGATTTTTCTCATTTGAGGAGCTCAAAAAAATGACAAATAACTTTTCAGAAACCAAT
GATATTGGATCTGGTGGTTATGGCAAGGTTTACAGAGGAACTCTTCCAAATGGACACCTG
GTTGCAGTTAAAAGAGCTCTACAAGGGTCTATGCAGGGTGCACTTGAGTTCAAAACTGAG
ATAGAACTTCTCTCAAGGGTTCATCACAAGAATGTCGTTGGCCTTGTTGGCTTTTGTTTC
GATCAAGCTGAACAGATGCTGGTGTATGAGTATATTCCTAATGGCACCTTAAAAGATGGT
CTTTCAGGCAAGACTGGGATCAGGTTAGATTGGATGAGGAGACTGAAGATAGCCCTTGGA
GCAGCCCGAGGTTTGCAGTATCTGCATGACCTTGTCAATCCTCCTATCATACACAGAGAC
ATCAAGTCCAACAACATCTTGCTGGATGAACGCCTAAACGCAAAAGTTGCTGATTTTGGT
TTGTCCAAGCTTCTAGGTGACTCTGAAAGGGGTCACATTACCACTCAGGTCAAAGGAACA
ATGGGCTACATGGATCCTGAATATTACATGACACAACAGCTGACTGAGAAGAGTGATGTT
TATAGCTTTGGAGTGGTACTGCTGGAGATTGTTACAGGAAAAATTCCTATTGAAAAAGGA
AGATATATTGTCAGGGAAGTGAGGACTGCAATGGACAAGACAAAAGACATGTATAACCTT
CACGAAATTTTGGATCCTGCTGTTCGCTCAGGTGCAACTCCTAAAAGCATAGAGAAGTTT
GTGGATCTTGCAATCAAGTGTGTTGAAGAAGAAGGAGTCAAGCGGCCTACAATGAGTGAA
GTGGTGAAAGAGATTGAGTATATTATGGAGATCGTAGGACTGAACCCAAATGCAGAATCA
GCTTCCACTTCAGAAACCTATGAAGGAGCAAACAAAGGCCTTCATCCTTATACTGATGAA
AGTCTCTTTGTCTATAGTGGGGCATATCCACCTTCAAAGTTAGAGCCCAAGTAA

Peptide Sequence

PEP ID

XP_016473458.1
PEP Infomation

PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Nicotiana tabacum]
Sequence

MVVSLAMMPRRIQLCFLVVWIHVLAISAWTNPDDFAALQSLKDSWQNVPPNWAGADPCGS
QWEGIGCRNSRVISITLSSMSLSGQLSGDIQGLSELQTLDLSYNKELTGSLPQSIGKLTK
LSNLILVGCGFSGPIPDSIGSLTQLVFLSLNSNNFIGRIPATIGYLSKLYWLDLADNKLT
GTLPVSSGSSPGLDMLLHTKHFHFGKNQLSGEIPAQLFHSNLTLIHLLVENNQLTGNIPD
TLGLVQTMEVLRLDRNSLSGSVPQNLNNLTHVNELHISNNNLNGLLPNLTGMNVLNYLDM
SNNSFNASDFPSWIPDLQSLTTVAMENTGLQGLVPAKLFSLFQLQTVNMRKNRLNGTLEI
DSSYSNQLQLIDMQSNLIDSFTQRPGYPFQILLAGNPVCNEGTTQTYCVQAQQADSYSTP
PENCLPTECSSDQISSPTCKCAFPYTGNLVFRAPSFSNLGNKTTYETLQKSLMLSFQNRQ
LPVDSVSLSNPTKNLDDYLVIHLQVFPSIQDYFNRTGVSGIGFVLSNQTFKPPSTFGPFF
FIGEGYKYFDGASSGSHKSSSTGIIIGAAVGGSVLVILALIVGLYAFRQKKRAEDAARRS
DPFASWDSNKHSGAVPQLTGARFFSFEELKKMTNNFSETNDIGSGGYGKVYRGTLPNGHL
VAVKRALQGSMQGALEFKTEIELLSRVHHKNVVGLVGFCFDQAEQMLVYEYIPNGTLKDG
LSGKTGIRLDWMRRLKIALGAARGLQYLHDLVNPPIIHRDIKSNNILLDERLNAKVADFG
LSKLLGDSERGHITTQVKGTMGYMDPEYYMTQQLTEKSDVYSFGVVLLEIVTGKIPIEKG
RYIVREVRTAMDKTKDMYNLHEILDPAVRSGATPKSIEKFVDLAIKCVEEEGVKRPTMSE
VVKEIEYIMEIVGLNPNAESASTSETYEGANKGLHPYTDESLFVYSGAYPPSKLEPK

Transcript Sequence

Gene sequence data has not been registered.